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Samarium in PDB 6jbo: Crystal Structure of Efeo-Like Protein ALGP7 Containing Samarium Ion

Protein crystallography data

The structure of Crystal Structure of Efeo-Like Protein ALGP7 Containing Samarium Ion, PDB code: 6jbo was solved by K.Okumura, R.Takase, Y.Maruyama, B.Mikami, K.Murata, W.Hashimoto, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.45 / 1.88
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 52.833, 97.509, 104.906, 90.00, 90.00, 90.00
R / Rfree (%) 18.5 / 22.5

Samarium Binding Sites:

The binding sites of Samarium atom in the Crystal Structure of Efeo-Like Protein ALGP7 Containing Samarium Ion (pdb code 6jbo). This binding sites where shown within 5.0 Angstroms radius around Samarium atom.
In total only one binding site of Samarium was determined in the Crystal Structure of Efeo-Like Protein ALGP7 Containing Samarium Ion, PDB code: 6jbo:

Samarium binding site 1 out of 1 in 6jbo

Go back to Samarium Binding Sites List in 6jbo
Samarium binding site 1 out of 1 in the Crystal Structure of Efeo-Like Protein ALGP7 Containing Samarium Ion


Mono view


Stereo pair view

A full contact list of Samarium with other atoms in the Sm binding site number 1 of Crystal Structure of Efeo-Like Protein ALGP7 Containing Samarium Ion within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Sm301

b:35.7
occ:0.59
O B:HOH528 2.6 37.2 1.0
O B:HOH564 2.8 37.2 1.0
O A:HOH574 2.8 39.8 1.0
O B:HOH524 2.9 39.7 1.0
NH1 B:ARG204 4.3 23.7 1.0
NH2 B:ARG212 4.5 34.0 1.0
O A:HOH439 4.8 39.1 1.0
O A:HOH598 4.8 50.4 1.0

Reference:

K.Okumura, R.Takase, Y.Maruyama, B.Mikami, K.Murata, W.Hashimoto. Rare Metal Binding By A Cell-Surface Component of Bacterial Efeuob Iron Importer To Be Published.
Page generated: Tue Aug 19 01:49:56 2025

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