Samarium in PDB 1xr5: Crystal Structure of the Rna-Dependent Rna Polymerase 3D From Human Rhinovirus Serotype 14

Enzymatic activity of Crystal Structure of the Rna-Dependent Rna Polymerase 3D From Human Rhinovirus Serotype 14

All present enzymatic activity of Crystal Structure of the Rna-Dependent Rna Polymerase 3D From Human Rhinovirus Serotype 14:
2.7.7.48;

Protein crystallography data

The structure of Crystal Structure of the Rna-Dependent Rna Polymerase 3D From Human Rhinovirus Serotype 14, PDB code: 1xr5 was solved by R.A.Love, K.A.Maegley, X.Yu, R.A.Ferre, L.K.Lingardo, W.Diehl, H.E.Parge, P.S.Dragovich, S.A.Fuhrman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	20.00 / 2.80
*Space group*	P 3₁ 2 1
*Cell size a, b, c (Å), α, β, γ (°)*	97.326, 97.326, 153.113, 90.00, 90.00, 120.00
*R / R_free (%)*	26.5 / 29.3

Samarium Binding Sites:

The binding sites of Samarium atom in the Crystal Structure of the Rna-Dependent Rna Polymerase 3D From Human Rhinovirus Serotype 14 (pdb code 1xr5). This binding sites where shown within 5.0 Angstroms radius around Samarium atom.
In total only one binding site of Samarium was determined in the Crystal Structure of the Rna-Dependent Rna Polymerase 3D From Human Rhinovirus Serotype 14, PDB code: 1xr5:

Samarium binding site 1 out of 1 in 1xr5

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Samarium Binding Sites List in 1xr5

Samarium binding site 1 out of 1 in the Crystal Structure of the Rna-Dependent Rna Polymerase 3D From Human Rhinovirus Serotype 14

Mono view

Stereo pair view

A full contact list of Samarium with other atoms in the Sm binding site number 1 of Crystal Structure of the Rna-Dependent Rna Polymerase 3D From Human Rhinovirus Serotype 14 within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Sm901 b:66.3 occ:1.00	OD1	A:ASP327	2.5	48.0	1.0
	OD2	A:ASP233	2.5	54.3	1.0
	OD2	A:ASP328	2.6	45.0	1.0
	O	A:HOH902	2.6	38.0	1.0
	OD1	A:ASP233	2.9	55.6	1.0
	O	A:HOH903	3.0	45.6	1.0
	CG	A:ASP233	3.1	53.9	1.0
	OD2	A:ASP327	3.1	47.9	1.0
	CG	A:ASP327	3.1	45.9	1.0
	CG	A:ASP328	3.4	44.5	1.0
	OD1	A:ASP328	3.7	45.3	1.0
	N	A:ASP328	4.3	44.4	1.0
	OD2	A:ASP357	4.4	73.0	1.0
	OD1	A:ASP357	4.5	72.2	1.0
	CB	A:ASP327	4.5	44.5	1.0
	CB	A:ASP233	4.6	52.4	1.0
	CB	A:ASP328	4.6	44.3	1.0
	CA	A:ASP328	4.7	44.3	1.0
	C	A:ASP327	4.9	44.3	1.0
	CG	A:ASP357	4.9	72.9	1.0

Reference:

R.A.Love, K.A.Maegley, X.Yu, R.A.Ferre, L.K.Lingardo, W.Diehl, H.E.Parge, P.S.Dragovich, S.A.Fuhrman. The Crystal Structure of the Rna-Dependent Rna Polymerase From Human Rhinovirus: A Dual-Function Target For Common Cold Antiviral Therapy Structure V. 12 1533 2004.
ISSN: ISSN 0969-2126
PubMed: 15296746
DOI: 10.1016/J.STR.2004.05.024

Page generated: Thu Oct 10 13:49:07 2024

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