Atomistry » Samarium » PDB 1a3c-5ktj » 4p1j
Atomistry »
  Samarium »
    PDB 1a3c-5ktj »
      4p1j »

Samarium in PDB 4p1j: Crystal Structure of Wild Type Hypocrea Jecorina CEL7A in A Hexagonal Crystal Form

Enzymatic activity of Crystal Structure of Wild Type Hypocrea Jecorina CEL7A in A Hexagonal Crystal Form

All present enzymatic activity of Crystal Structure of Wild Type Hypocrea Jecorina CEL7A in A Hexagonal Crystal Form:
3.2.1.91;

Protein crystallography data

The structure of Crystal Structure of Wild Type Hypocrea Jecorina CEL7A in A Hexagonal Crystal Form, PDB code: 4p1j was solved by A.B.Bodenheimer, M.J.Cuneo, P.D.Swartz, D.A.Myles, F.Meilleur, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 134.67 / 2.62
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 155.505, 155.505, 137.958, 90.00, 90.00, 120.00
R / Rfree (%) 17 / 21.3

Samarium Binding Sites:

The binding sites of Samarium atom in the Crystal Structure of Wild Type Hypocrea Jecorina CEL7A in A Hexagonal Crystal Form (pdb code 4p1j). This binding sites where shown within 5.0 Angstroms radius around Samarium atom.
In total 5 binding sites of Samarium where determined in the Crystal Structure of Wild Type Hypocrea Jecorina CEL7A in A Hexagonal Crystal Form, PDB code: 4p1j:
Jump to Samarium binding site number: 1; 2; 3; 4; 5;

Samarium binding site 1 out of 5 in 4p1j

Go back to Samarium Binding Sites List in 4p1j
Samarium binding site 1 out of 5 in the Crystal Structure of Wild Type Hypocrea Jecorina CEL7A in A Hexagonal Crystal Form


Mono view


Stereo pair view

A full contact list of Samarium with other atoms in the Sm binding site number 1 of Crystal Structure of Wild Type Hypocrea Jecorina CEL7A in A Hexagonal Crystal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Sm504

b:25.7
occ:0.55
 OE2 A:GLU325 2.2 34.7 1.0
OE1 A:GLU325 2.3 43.6 1.0
OE2 A:GLU295 2.3 34.1 1.0
CD A:GLU325 2.4 48.3 1.0
OE1 A:GLU295 2.4 30.4 1.0
CD A:GLU295 2.7 29.2 1.0
CG A:GLU325 3.9 41.9 1.0
CG A:GLU295 4.2 26.4 1.0
O A:HOH605 4.5 19.4 1.0
CB A:ASN301 4.7 26.9 1.0
O A:HOH602 4.8 26.2 1.0
O A:HOH634 4.9 23.2 1.0
CB A:GLU325 4.9 33.5 1.0
CG A:ASN301 5.0 29.5 1.0

Samarium binding site 2 out of 5 in 4p1j

Go back to Samarium Binding Sites List in 4p1j
Samarium binding site 2 out of 5 in the Crystal Structure of Wild Type Hypocrea Jecorina CEL7A in A Hexagonal Crystal Form


Mono view


Stereo pair view

A full contact list of Samarium with other atoms in the Sm binding site number 2 of Crystal Structure of Wild Type Hypocrea Jecorina CEL7A in A Hexagonal Crystal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Sm505

b:41.2
occ:1.00
 OE1 A:GLU337 2.0 46.7 1.0
O A:HOH613 2.0 33.4 1.0
O A:HOH615 2.3 34.2 1.0
O A:HOH603 2.4 27.3 1.0
O A:HOH625 2.5 50.4 1.0
CD A:GLU337 2.8 43.6 1.0
OE2 A:GLU337 3.0 47.0 1.0
CG A:GLU337 4.1 40.7 1.0
O A:HOH623 4.5 23.5 1.0
O A:HOH636 4.6 21.9 1.0

Samarium binding site 3 out of 5 in 4p1j

Go back to Samarium Binding Sites List in 4p1j
Samarium binding site 3 out of 5 in the Crystal Structure of Wild Type Hypocrea Jecorina CEL7A in A Hexagonal Crystal Form


Mono view


Stereo pair view

A full contact list of Samarium with other atoms in the Sm binding site number 3 of Crystal Structure of Wild Type Hypocrea Jecorina CEL7A in A Hexagonal Crystal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Sm506

b:75.7
occ:0.50
 O A:HOH601 2.0 17.9 1.0
OD2 A:ASP328 2.6 44.8 1.0
OD1 A:ASP329 2.9 51.8 1.0
OD2 A:ASP329 3.0 46.5 1.0
CG A:ASP329 3.2 40.6 1.0
O A:HOH631 3.2 30.2 1.0
CG A:ASP328 3.9 58.4 1.0
CB A:ASP329 4.5 35.5 1.0
CB A:ASP328 4.6 44.9 1.0
N A:ASP329 4.7 29.9 1.0
OD1 A:ASP328 4.9 50.9 1.0
CA A:ASP329 4.9 30.4 1.0

Samarium binding site 4 out of 5 in 4p1j

Go back to Samarium Binding Sites List in 4p1j
Samarium binding site 4 out of 5 in the Crystal Structure of Wild Type Hypocrea Jecorina CEL7A in A Hexagonal Crystal Form


Mono view


Stereo pair view

A full contact list of Samarium with other atoms in the Sm binding site number 4 of Crystal Structure of Wild Type Hypocrea Jecorina CEL7A in A Hexagonal Crystal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Sm507

b:83.5
occ:0.90
 OE1 A:GLU236 2.8 71.8 1.0
O A:HOH633 2.9 51.1 1.0
O A:ILE237 2.9 37.3 1.0
O A:HOH632 3.3 26.3 1.0
CD A:GLU236 3.5 72.6 1.0
OE2 A:GLU236 3.6 92.3 1.0
O A:HOH619 3.8 43.2 1.0
C A:ILE237 4.1 34.4 1.0
CA A:CYS238 4.4 34.8 1.0
O A:HOH629 4.5 36.9 1.0
O A:HOH635 4.5 45.7 1.0
N A:CYS238 4.7 32.1 1.0
CG2 A:ILE237 4.9 38.1 1.0
CG A:GLU236 4.9 64.0 1.0
CB A:CYS238 4.9 36.6 1.0

Samarium binding site 5 out of 5 in 4p1j

Go back to Samarium Binding Sites List in 4p1j
Samarium binding site 5 out of 5 in the Crystal Structure of Wild Type Hypocrea Jecorina CEL7A in A Hexagonal Crystal Form


Mono view


Stereo pair view

A full contact list of Samarium with other atoms in the Sm binding site number 5 of Crystal Structure of Wild Type Hypocrea Jecorina CEL7A in A Hexagonal Crystal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Sm508

b:74.2
occ:0.50
 OD1 A:ASP345 2.3 67.0 1.0
CG A:ASP345 3.5 49.9 1.0
OD2 A:ASP345 4.1 56.4 1.0
CB A:ASP345 4.6 45.1 1.0
OG A:SER341 4.7 45.7 1.0
CA A:ASP345 4.8 40.4 1.0
CB A:SER341 4.9 42.0 1.0

Reference:

A.B.Bodenheimer, M.J.Cuneo, P.D.Swartz, D.A.Myles, F.Meilleur, H.M.O'neill, J.He, B.R.Evans. Crystal Structure of Wild Type Hypocrea Jecorina CEL7A in A Hexagonal Crystal Form To Be Published.
Page generated: Wed Dec 16 02:10:03 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy