Atomistry » Samarium » PDB 1a3c-5ktj » 1tvg
Atomistry »
  Samarium »
    PDB 1a3c-5ktj »
      1tvg »

Samarium in PDB 1tvg: X-Ray Structure of Human PP25 Gene Product, HSPC034. Northeast Structural Genomics Target HR1958.

Protein crystallography data

The structure of X-Ray Structure of Human PP25 Gene Product, HSPC034. Northeast Structural Genomics Target HR1958., PDB code: 1tvg was solved by A.P.Kuzin, S.M.Vorobiev, I.Lee, T.B.Acton, G.T.Montelione, L.Tong, J.F.Hunt, Northeast Structural Genomics Consortium(Nesg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.74 / 1.60
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 70.974, 41.617, 46.779, 90.00, 102.19, 90.00
R / Rfree (%) 21.5 / 24.4

Other elements in 1tvg:

The structure of X-Ray Structure of Human PP25 Gene Product, HSPC034. Northeast Structural Genomics Target HR1958. also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Samarium Binding Sites:

The binding sites of Samarium atom in the X-Ray Structure of Human PP25 Gene Product, HSPC034. Northeast Structural Genomics Target HR1958. (pdb code 1tvg). This binding sites where shown within 5.0 Angstroms radius around Samarium atom.
In total only one binding site of Samarium was determined in the X-Ray Structure of Human PP25 Gene Product, HSPC034. Northeast Structural Genomics Target HR1958., PDB code: 1tvg:

Samarium binding site 1 out of 1 in 1tvg

Go back to Samarium Binding Sites List in 1tvg
Samarium binding site 1 out of 1 in the X-Ray Structure of Human PP25 Gene Product, HSPC034. Northeast Structural Genomics Target HR1958.


Mono view


Stereo pair view

A full contact list of Samarium with other atoms in the Sm binding site number 1 of X-Ray Structure of Human PP25 Gene Product, HSPC034. Northeast Structural Genomics Target HR1958. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Sm331

b:23.6
occ:0.50
OD2 A:ASP92 2.3 26.9 1.0
CG A:ASP92 3.5 26.3 1.0
O A:HOH433 4.3 36.8 1.0
OD1 A:ASP92 4.4 28.6 1.0
CB A:ASP92 4.4 22.5 1.0

Reference:

T.A.Ramelot, S.Raman, A.P.Kuzin, R.Xiao, L.C.Ma, T.B.Acton, J.F.Hunt, G.T.Montelione, D.Baker, M.A.Kennedy. Improving uc(Nmr) Protein Structure Quality By Rosetta Refinement: A Molecular Replacement Study. Proteins V. 75 147 2009.
ISSN: ISSN 0887-3585
PubMed: 18816799
DOI: 10.1002/PROT.22229
Page generated: Wed Dec 16 02:09:49 2020

Last articles

Zn in 7O75
Zn in 7O73
Zn in 7O4I
Zn in 7O72
Zn in 7O4J
Zn in 7NVR
Zn in 7NVY
Zn in 7NVZ
Zn in 7NW0
Zn in 7O4K
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy